EnhancerDB
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  3. rs34216334[chr1:27063419]
Enhancers that have rs34216334[chr1:27063419]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27058625 27079175 enh167
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Bone (Osteoblast) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs34216334[chr1:27063419]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27063398 27063419 IRF1 JASPAR yes 27654333
chr1 27063411 27063427 SOX8 JASPAR yes 27654336
Genes associated with rs34216334[chr1:27063419], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 27113963 27124889 + PIGV ENSG00000060642.6 27113963 50544 Stomach 1.18847e-05 374