EnhancerDB
  1. Home
  2. SNP
  3. rs34218941[chr16:85356220]
Enhancers that have rs34218941[chr16:85356220]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85333005 85372015 enh16866
Bone Marrow (K562) Brain (SK-N-MC) Liver Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs34218941[chr16:85356220]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85354344 85356359 ZNF274 GTRD no Bone Marrow (K562) 21723435
chr16 85354344 85356359 ZNF274 GTRD no Bone Marrow (K562) 108213737
chr16 85356028 85357863 ZNF143 GTRD no Epithelial (MCF-7) 21723518
chr16 85356028 85357863 ZNF143 GTRD no Epithelial (MCF-7) 108213811
chr16 85356040 85357907 TCF7L2 GTRD no Colon (HCT116) 21723519
chr16 85356040 85357907 TCF7L2 GTRD no Colon (HCT116) 108213812
chr16 85356056 85357821 ZNF143 GTRD no Epithelial (MCF-7) 21723520
chr16 85356056 85357821 ZNF143 GTRD no Epithelial (MCF-7) 108213813
chr16 85356095 85356567 ZNF274 GTRD no Bone Marrow (K562) 21723521
chr16 85356095 85356567 ZNF274 GTRD no Bone Marrow (K562) 108213814
chr16 85356145 85356520 TCF7L2 GTRD no Colon (HCT116) 21723522
chr16 85356208 85356229 IRF1 JASPAR yes 12047223
chr16 85356214 85356235 IRF1 JASPAR yes 12047225
chr16 85356215 85356236 IRF1 JASPAR yes 12047226
chr16 85356216 85356231 STAT2 JASPAR yes 12047227
chr16 85356216 85356237 IRF1 JASPAR yes 12047228
chr16 85356217 85356238 IRF1 JASPAR yes 12047229
chr16 85356218 85356239 IRF1 JASPAR yes 12047230
chr16 85356219 85356234 FOXP1 JASPAR yes 12047231
chr16 85356219 85356240 IRF1 JASPAR yes 12047232
chr16 85356220 85356235 FOXP1 JASPAR yes 12047233
Genes associated with rs34218941[chr16:85356220], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More