EnhancerDB
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  3. rs34238089[chr17:62988823]
Enhancers that have rs34238089[chr17:62988823]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 62953485 63000035 enh4531
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs34238089[chr17:62988823]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 62985563 62989044 ZNF143 GTRD no Epithelial (MCF-7) 21780807
chr17 62985563 62989044 ZNF143 GTRD no Epithelial (MCF-7) 108283232
chr17 62988358 62988934 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21780864
chr17 62988360 62989020 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21780865
chr17 62988376 62988916 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21780867
chr17 62988392 62988962 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21780868
chr17 62988404 62988888 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21780870
chr17 62988420 62988884 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21780874
chr17 62988469 62988839 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21780876
chr17 62988477 62988861 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21780877
chr17 62988503 62988899 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21780883
chr17 62988517 62988827 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21780886
chr17 62988576 62988886 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21780892
chr17 62988586 62988850 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21780893
chr17 62988628 62988828 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21780894
chr17 62988719 62989029 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21780897
chr17 62988818 62988837 PAX5 JASPAR yes 55336526
Genes associated with rs34238089[chr17:62988823], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More