EnhancerDB
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Enhancers that have rs34248001[chr19:2575087]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2555465 2582297 enh17850
Astrocyte Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung
Transcript factors that have rs34248001[chr19:2575087]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2575067 2575088 IRF1 JASPAR yes 112077174
chr19 2575069 2575090 ZNF263 JASPAR yes 112077176
chr19 2575071 2575092 IRF1 JASPAR yes 112077177
chr19 2575073 2575094 IRF1 JASPAR yes 112077178
chr19 2575077 2575098 IRF1 JASPAR yes 112077179
chr19 2575079 2575094 PRDM1 JASPAR yes 112077180
chr19 2575079 2575094 STAT2 JASPAR yes 112077181
chr19 2575080 2575094 SPIC JASPAR yes 112077182
chr19 2575080 2575094 STAT1 JASPAR yes 112077183
chr19 2575081 2575102 IRF1 JASPAR yes 112077184
chr19 2575082 2575097 FOXP1 JASPAR yes 112077185
chr19 2575084 2575099 FOXP1 JASPAR yes 112077186
chr19 2575086 2575101 FOXP1 JASPAR yes 112077187
chr19 2575087 2575102 FOXP1 JASPAR yes 112077188
Genes associated with rs34248001[chr19:2575087], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More