EnhancerDB
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  3. rs34494202[chr1:12612868]
Enhancers that have rs34494202[chr1:12612868]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 12597605 12619763 enh11515
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Lung Heart
Transcript factors that have rs34494202[chr1:12612868]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 12612854 12612869 TFAP2A JASPAR yes 26833140
chr1 12612854 12612869 TFAP2C JASPAR yes 26833141
chr1 12612854 12612871 RARA JASPAR yes 26833142
chr1 12612863 12612878 TFAP2A JASPAR yes 26833143
chr1 12612868 12612877 TFAP2A JASPAR yes 26833144
Genes associated with rs34494202[chr1:12612868], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More