EnhancerDB
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  3. rs34503989[chr1:204047379]
Enhancers that have rs34503989[chr1:204047379]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 204045525 204080675 enh12573
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs34503989[chr1:204047379]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 204047377 204047397 ESR1 JASPAR yes 34676667
chr1 204047378 204047393 AR JASPAR yes 34676668
chr1 204047378 204047398 ESR1 JASPAR yes 34676669
Genes associated with rs34503989[chr1:204047379], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 204042243 204096863 + SOX13 ENSG00000143842.10 204042243 0 Thyroid 0.262054 1746