EnhancerDB
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  3. rs34555292[chr12:50938424]
Enhancers that have rs34555292[chr12:50938424]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 50906745 50954311 enh2346
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs34555292[chr12:50938424]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 50938403 50938424 IRF1 JASPAR yes 120841468
chr12 50938404 50938425 IRF1 JASPAR yes 120841470
chr12 50938409 50938424 FOXP1 JASPAR yes 120841474
chr12 50938410 50938425 FOXP1 JASPAR yes 120841475
chr12 50938411 50938426 FOXP1 JASPAR yes 120841476
chr12 50938412 50938427 FOXP1 JASPAR yes 120841477
Genes associated with rs34555292[chr12:50938424], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More