EnhancerDB
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Enhancers that have rs345638[chr19:13946886]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 13941465 13967615 enh5016
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs345638[chr19:13946886]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 13946055 13947136 P63 GTRD no Skin (Keratinocyte) 21851692
chr19 13946091 13947136 P63 GTRD no Skin (Keratinocyte) 21851693
chr19 13946189 13947093 P63 GTRD no Skin (Keratinocyte) 21851694
chr19 13946287 13947138 P63 GTRD no Skin (Keratinocyte) 21851696
chr19 13946403 13948393 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21851698
chr19 13946662 13947066 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21851700
chr19 13946880 13946886 GATA3 JASPAR yes 112536081
chr19 13946885 13946896 GCM1 JASPAR yes 112536082
Genes associated with rs345638[chr19:13946886], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More