EnhancerDB
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  3. rs34564198[chr18:55467220]
Enhancers that have rs34564198[chr18:55467220]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 55430385 55468195 enh17731
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs34564198[chr18:55467220]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 55467212 55467228 POU4F3 JASPAR yes 110888106
chr18 55467213 55467223 PAX3 JASPAR yes 110888107
chr18 55467213 55467223 PAX7 JASPAR yes 110888108
chr18 55467214 55467228 POU4F1 JASPAR yes 110888109
chr18 55467214 55467229 HNF1A JASPAR yes 110888110
chr18 55467215 55467228 HNF1B JASPAR yes 110888111
Genes associated with rs34564198[chr18:55467220], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More