EnhancerDB
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  3. rs34598339[chr17:39064778]
Enhancers that have rs34598339[chr17:39064778]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 39055145 39077753 enh17145
Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Lung (A549) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs34598339[chr17:39064778]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 39064772 39064793 IRF1 JASPAR yes 54243092
chr17 39064773 39064788 FOXP1 JASPAR yes 54243093
chr17 39064774 39064785 FOXP2 JASPAR yes 54243094
chr17 39064775 39064790 FOXP1 JASPAR yes 54243095
chr17 39064777 39064797 RREB1 JASPAR yes 54243096
chr17 39064777 39064798 IRF1 JASPAR yes 54243097
Genes associated with rs34598339[chr17:39064778], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More