EnhancerDB
  1. Home
  2. SNP
  3. rs34642188[chr1:55430021]
Enhancers that have rs34642188[chr1:55430021]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 55426360 55441461 enh371
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Muscle (A673) Placenta Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Neural Stem Cells (H9) Stomach
Transcript factors that have rs34642188[chr1:55430021]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 55426206 55431252 ZNF274 GTRD no Cervix (HeLa-S3) 21325384
chr1 55430011 55430032 IRF1 JASPAR yes 29011204
chr1 55430013 55430028 PRDM1 JASPAR yes 29011205
chr1 55430013 55430028 STAT2 JASPAR yes 29011206
chr1 55430016 55430031 FOXP1 JASPAR yes 29011207
Genes associated with rs34642188[chr1:55430021], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More