EnhancerDB
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  3. rs34820563[chr2:28862358]
Enhancers that have rs34820563[chr2:28862358]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 28854725 28893200 enh18394
Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs34820563[chr2:28862358]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 28862352 28862367 STAT1 JASPAR yes 72662656
chr2 28862354 28862365 STAT1 JASPAR yes 72662657
chr2 28862354 28862365 STAT3 JASPAR yes 72662658
Genes associated with rs34820563[chr2:28862358], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More