EnhancerDB
  1. Home
  2. SNP
  3. rs34858190[chr12:52613628]
Enhancers that have rs34858190[chr12:52613628]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52591245 52620175 enh14727
Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs34858190[chr12:52613628]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52613271 52613870 ZNF143 GTRD no Epithelial (MCF-7) 21546839
chr12 52613286 52613860 ZNF143 GTRD no Epithelial (MCF-7) 21546840
chr12 52613373 52613810 ZNF143 GTRD no Epithelial (MCF-7) 21546841
chr12 52613621 52613633 YY1 JASPAR yes 120929840
chr12 52613626 52613630 YY1 TRANSFAC yes 120929841
Genes associated with rs34858190[chr12:52613628], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More