EnhancerDB
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  3. rs34860552[chr1:36704858]
Enhancers that have rs34860552[chr1:36704858]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 36701987 36724964 enh240
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs34860552[chr1:36704858]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 36704850 36704871 IRF1 JASPAR yes 28128146
chr1 36704852 36704873 IRF1 JASPAR yes 28128147
chr1 36704853 36704874 IRF1 JASPAR yes 28128148
chr1 36704854 36704875 IRF1 JASPAR yes 28128149
chr1 36704855 36704870 FOXP1 JASPAR yes 28128150
chr1 36704855 36704876 IRF1 JASPAR yes 28128151
chr1 36704856 36704877 IRF1 JASPAR yes 28128152
chr1 36704857 36704872 FOXP1 JASPAR yes 28128153
chr1 36704857 36704878 IRF1 JASPAR yes 28128154
chr1 36704858 36704873 FOXP1 JASPAR yes 28128155
chr1 36704858 36704879 IRF1 JASPAR yes 28128156
Genes associated with rs34860552[chr1:36704858], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More