EnhancerDB
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  3. rs34876555[chr17:10023426]
Enhancers that have rs34876555[chr17:10023426]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 10015545 10033776 enh4251
Brain (SK-N-SH) Epithelial (MCF-7) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Stomach Muscle (A673) Placenta Colon (HCT116) Uterus Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
chr17 10023147 10023510 vista23985
VISTA
Transcript factors that have rs34876555[chr17:10023426]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 10023128 10023452 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108239073
chr17 10023408 10023426 RARA JASPAR yes 21198829
chr17 10023408 10023426 RARA JASPAR yes 53089410
chr17 10023416 10023426 SP1 JASPAR yes 21198832
chr17 10023416 10023426 SP1 JASPAR yes 53089413
chr17 10023421 10023430 SP1 TRANSFAC yes 21198834
chr17 10023421 10023430 SP1 TRANSFAC yes 53089415
chr17 10023422 10023428 SP1 TRANSFAC yes 21198835
chr17 10023422 10023428 SP1 TRANSFAC yes 53089416
chr17 10023422 10023432 SP1 JASPAR yes 21198836
chr17 10023422 10023432 SP1 JASPAR yes 53089417
chr17 10023423 10023430 SP1 TRANSFAC yes 21198837
chr17 10023423 10023430 SP1 TRANSFAC yes 53089418
chr17 10023424 10023429 SP1 TRANSFAC yes 21198838
chr17 10023424 10023429 SP1 TRANSFAC yes 53089419
chr17 10023424 10023430 SP1 TRANSFAC yes 21198839
chr17 10023424 10023430 SP1 TRANSFAC yes 53089420
Genes associated with rs34876555[chr17:10023426], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More