EnhancerDB
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  3. rs34878954[chr17:10028384]
Enhancers that have rs34878954[chr17:10028384]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 10015545 10033776 enh4251
Brain (SK-N-SH) Epithelial (MCF-7) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Stomach Muscle (A673) Placenta Colon (HCT116) Uterus Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs34878954[chr17:10028384]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 10028377 10028392 FOXP1 JASPAR yes 53090040
chr17 10028381 10028396 FOXP1 JASPAR yes 53090041
chr17 10028382 10028397 FOXP1 JASPAR yes 53090042
chr17 10028382 10028403 IRF1 JASPAR yes 53090043
chr17 10028383 10028389 TBP TRANSFAC yes 53090044
chr17 10028383 10028398 FOXP1 JASPAR yes 53090045
chr17 10028384 10028399 FOXP1 JASPAR yes 53090046
Genes associated with rs34878954[chr17:10028384], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More