EnhancerDB
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  3. rs34898090[chr12:96817000]
Enhancers that have rs34898090[chr12:96817000]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 96795782 96855361 enh14922
Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs34898090[chr12:96817000]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 96816997 96817012 FOXP1 JASPAR yes 123068871
chr12 96816998 96817013 FOXP1 JASPAR yes 123068872
chr12 96816999 96817014 FOXP1 JASPAR yes 123068873
chr12 96816999 96817020 IRF1 JASPAR yes 123068874
chr12 96817000 96817015 FOXP1 JASPAR yes 123068875
chr12 96817000 96817021 IRF1 JASPAR yes 123068876
Genes associated with rs34898090[chr12:96817000], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More