EnhancerDB
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Enhancers that have rs35101888[chr17:39808265]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 39800139 39815735 enh17152
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Lung (A549) Stomach Placenta Colon (HCT116) Thyroid Muscle (Myoblast) Breast Muscle (Myotube) Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs35101888[chr17:39808265]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 39807813 39808473 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21758044
chr17 39807813 39808473 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108259200
chr17 39807818 39808274 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21758045
chr17 39807818 39808274 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108259201
chr17 39808041 39808267 ZNF274 GTRD no Blood (GM12878) 108259203
chr17 39808245 39808265 RREB1 JASPAR yes 54268641
chr17 39808252 39808272 RREB1 JASPAR yes 54268643
chr17 39808255 39808275 RREB1 JASPAR yes 54268644
chr17 39808256 39808276 RREB1 JASPAR yes 54268645
chr17 39808260 39808280 RREB1 JASPAR yes 54268646
chr17 39808262 39808282 RREB1 JASPAR yes 54268647
chr17 39808264 39808284 RREB1 JASPAR yes 54268648
Genes associated with rs35101888[chr17:39808265], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More