EnhancerDB
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  3. rs35286424[chr1:201742247]
Enhancers that have rs35286424[chr1:201742247]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201710292 201749335 enh12527
Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Lung (A549) Stomach Muscle (A673) Placenta Thyroid Uterus Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Neural Stem Cells (H9) Heart
Transcript factors that have rs35286424[chr1:201742247]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201738081 201742956 ZNF143 GTRD no Epithelial (MCF-7) 107857096
chr1 201738081 201742956 ZNF143 GTRD no Epithelial (MCF-7) 107857097
chr1 201738082 201743153 ZNF143 GTRD no Epithelial (MCF-7) 107857098
chr1 201738082 201743153 ZNF143 GTRD no Epithelial (MCF-7) 107857099
chr1 201738150 201746951 ZNF143 GTRD no Epithelial (MCF-7) 107857100
chr1 201738150 201746951 ZNF143 GTRD no Epithelial (MCF-7) 107857101
chr1 201738150 201746951 ZNF143 GTRD no Epithelial (MCF-7) 107857102
chr1 201738449 201743729 ZNF143 GTRD no Epithelial (MCF-7) 107857103
chr1 201738449 201743729 ZNF143 GTRD no Epithelial (MCF-7) 107857104
chr1 201738462 201742325 ZNF143 GTRD no Epithelial (MCF-7) 107857105
chr1 201738601 201743177 ZNF143 GTRD no Epithelial (MCF-7) 107857106
chr1 201738601 201743177 ZNF143 GTRD no Epithelial (MCF-7) 107857107
chr1 201738751 201743050 ZNF143 GTRD no Epithelial (MCF-7) 107857109
chr1 201738751 201743050 ZNF143 GTRD no Epithelial (MCF-7) 107857110
chr1 201738972 201742525 ZNF143 GTRD no Epithelial (MCF-7) 107857119
chr1 201739466 201742269 ZNF143 GTRD no Epithelial (MCF-7) 107857137
chr1 201740997 201743152 ZNF143 GTRD no Epithelial (MCF-7) 107857142
chr1 201742239 201742249 GSC2 JASPAR yes 34531891
chr1 201742239 201742249 GSC JASPAR yes 34531892
chr1 201742240 201742248 OTX1 JASPAR yes 34531893
chr1 201742240 201742248 OTX2 JASPAR yes 34531894
chr1 201742240 201742248 RHOXF1 JASPAR yes 34531895
chr1 201742240 201742249 PITX3 JASPAR yes 34531896
Genes associated with rs35286424[chr1:201742247], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More