EnhancerDB
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  3. rs353227[chr5:148837555]
Enhancers that have rs353227[chr5:148837555]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 148806414 148838675 enh22700
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs353227[chr5:148837555]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 148837551 148837565 PLAG1 JASPAR yes 66817027
Genes associated with rs353227[chr5:148837555], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr5 149546358 149564120 + CDX1 ENSG00000113722.12 149546358 708803 Ovary 0.316885 5875