EnhancerDB
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  3. rs353249[chr5:148824756]
Enhancers that have rs353249[chr5:148824756]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 148806414 148838675 enh22700
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr5 148821355 148824866 vista1379
VISTA
Transcript factors that have rs353249[chr5:148824756]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 148824751 148824761 CLOCK JASPAR yes 66814944
chr5 148824751 148824761 MAX JASPAR yes 66814945
chr5 148824751 148824761 MNT JASPAR yes 66814946
chr5 148824751 148824761 CLOCK JASPAR yes 111950696
chr5 148824751 148824761 MAX JASPAR yes 111950697
chr5 148824751 148824761 MNT JASPAR yes 111950698
chr5 148824752 148824759 USF1 JASPAR yes 66814947
chr5 148824752 148824759 USF1 JASPAR yes 111950699
chr5 148824752 148824762 MAX JASPAR yes 66814948
chr5 148824752 148824762 MAX JASPAR yes 111950700
chr5 148824753 148824758 MYC TRANSFAC yes 66814949
chr5 148824753 148824758 USF1 TRANSFAC yes 66814950
chr5 148824753 148824758 USF2 TRANSFAC yes 66814951
chr5 148824753 148824758 MYC TRANSFAC yes 111950701
chr5 148824753 148824758 USF1 TRANSFAC yes 111950702
chr5 148824753 148824758 USF2 TRANSFAC yes 111950703
Genes associated with rs353249[chr5:148824756], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr5 149109861 149234585 + PPARGC1B ENSG00000155846.12 149109861 285105 Breast 0.210362 5868