EnhancerDB
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  3. rs35341260[chr6:35568320]
Enhancers that have rs35341260[chr6:35568320]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 35560685 35576643 enh9078
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Peripheral Blood (MM.1S) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr6 35568316 35568651 vista51717
VISTA
Transcript factors that have rs35341260[chr6:35568320]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 35568315 35568322 TBP TRANSFAC yes 70352932
chr6 35568315 35568322 TFIID TRANSFAC yes 70352933
chr6 35568315 35568322 TBP TRANSFAC yes 101293880
chr6 35568315 35568322 TFIID TRANSFAC yes 101293881
chr6 35568317 35568332 FOXP1 JASPAR yes 70352934
chr6 35568317 35568332 FOXP1 JASPAR yes 101293882
chr6 35568318 35568333 FOXP1 JASPAR yes 70352935
chr6 35568318 35568333 FOXP1 JASPAR yes 101293883
chr6 35568319 35568325 TBP TRANSFAC yes 70352936
chr6 35568319 35568325 TBP TRANSFAC yes 101293884
chr6 35568320 35568335 FOXP1 JASPAR yes 70352937
chr6 35568320 35568335 FOXP1 JASPAR yes 101293885
Genes associated with rs35341260[chr6:35568320], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More