EnhancerDB
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  3. rs35760652[chr19:2546434]
Enhancers that have rs35760652[chr19:2546434]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2521384 2555115 enh4959
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs35760652[chr19:2546434]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2545597 2547294 ZNF274 GTRD no Blood (GM12878) 108362367
chr19 2545613 2546689 ZNF274 GTRD no Blood (GM12878) 108362368
chr19 2545653 2547193 TCF7L2 GTRD no Colon (HCT116) 21837071
chr19 2545653 2547193 TCF7L2 GTRD no Colon (HCT116) 108362369
chr19 2545665 2548212 ZNF274 GTRD no Liver (HepG2) 21837072
chr19 2545665 2548212 ZNF274 GTRD no Liver (HepG2) 108362370
chr19 2545695 2546821 ZNF274 GTRD no Blood (GM12878) 108362373
chr19 2545707 2547566 ZNF274 GTRD no Liver (HepG2) 21837073
chr19 2545707 2547566 ZNF274 GTRD no Liver (HepG2) 108362374
chr19 2545710 2548076 ZNF274 GTRD no Liver (HepG2) 21837074
chr19 2545710 2548076 ZNF274 GTRD no Liver (HepG2) 108362375
chr19 2545723 2547981 ZNF274 GTRD no Liver (HepG2) 21837075
chr19 2545723 2547981 ZNF274 GTRD no Liver (HepG2) 108362377
chr19 2545748 2547522 ZNF274 GTRD no Liver (HepG2) 21837076
chr19 2545748 2547522 ZNF274 GTRD no Liver (HepG2) 108362380
chr19 2545769 2548050 ZNF274 GTRD no Liver (HepG2) 21837077
chr19 2545769 2548050 ZNF274 GTRD no Liver (HepG2) 108362381
chr19 2545780 2548156 ZNF274 GTRD no Liver (HepG2) 21837078
chr19 2545780 2548156 ZNF274 GTRD no Liver (HepG2) 108362383
chr19 2545783 2547026 TCF7L2 GTRD no Colon (HCT116) 21837079
chr19 2545783 2547026 TCF7L2 GTRD no Colon (HCT116) 108362384
chr19 2545790 2547257 ZNF274 GTRD no Blood (GM12878) 108362385
chr19 2545803 2547156 TCF7L2 GTRD no Colon (HCT116) 21837080
chr19 2545803 2547156 TCF7L2 GTRD no Colon (HCT116) 108362386
chr19 2545810 2547615 ZNF274 GTRD no Liver (HepG2) 21837081
chr19 2545810 2547615 ZNF274 GTRD no Liver (HepG2) 108362387
chr19 2545831 2547879 ZNF274 GTRD no Liver (HepG2) 21837082
chr19 2545831 2547879 ZNF274 GTRD no Liver (HepG2) 108362389
chr19 2545834 2547475 ZNF274 GTRD no Liver (HepG2) 21837083
chr19 2545834 2547475 ZNF274 GTRD no Liver (HepG2) 108362390
chr19 2545837 2548153 ZNF274 GTRD no Liver (HepG2) 21837084
chr19 2545837 2548153 ZNF274 GTRD no Liver (HepG2) 108362392
chr19 2545847 2548103 ZNF274 GTRD no Liver (HepG2) 21837085
chr19 2545847 2548103 ZNF274 GTRD no Liver (HepG2) 108362393
chr19 2545857 2547721 ZNF274 GTRD no Liver (HepG2) 21837086
chr19 2545857 2547721 ZNF274 GTRD no Liver (HepG2) 108362394
chr19 2545871 2547558 ZNF274 GTRD no Liver (HepG2) 21837087
chr19 2545871 2547558 ZNF274 GTRD no Liver (HepG2) 108362395
chr19 2545883 2547582 ZNF274 GTRD no Liver (HepG2) 21837088
chr19 2545883 2547582 ZNF274 GTRD no Liver (HepG2) 108362396
chr19 2545901 2547283 TCF7L2 GTRD no Colon (HCT116) 21837089
chr19 2545901 2547283 TCF7L2 GTRD no Colon (HCT116) 108362397
chr19 2545931 2546589 ZNF274 GTRD no Blood (GM12878) 108362398
chr19 2545935 2546947 TCF7L2 GTRD no Colon (HCT116) 21837090
chr19 2545935 2546947 TCF7L2 GTRD no Colon (HCT116) 108362399
chr19 2545997 2546815 ZNF274 GTRD no Liver (HepG2) 21837091
chr19 2545997 2546815 ZNF274 GTRD no Liver (HepG2) 108362400
chr19 2546430 2546439 THAP1 JASPAR yes 112072734
chr19 2546432 2546443 E2F1 JASPAR yes 112072735
chr19 2546433 2546438 SP1 TRANSFAC yes 112072736
chr19 2546433 2546444 E2F4 JASPAR yes 112072737
chr19 2546433 2546444 E2F6 JASPAR yes 112072738
chr19 2546434 2546439 SP1 TRANSFAC yes 112072739
Genes associated with rs35760652[chr19:2546434], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More