EnhancerDB
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  3. rs35787518[chr3:8566845]
Enhancers that have rs35787518[chr3:8566845]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 8538945 8574055 enh35162
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Stomach Brain (SK-N-SH) Ovary Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Lung Muscle (A673) Heart
Transcript factors that have rs35787518[chr3:8566845]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 8566839 8566849 ALX3 JASPAR yes 300664
chr3 8566840 8566848 LHX9 JASPAR yes 300665
chr3 8566840 8566848 SHOX JASPAR yes 300666
chr3 8566842 8566860 RARA JASPAR yes 300667
chr3 8566843 8566848 MYB TRANSFAC yes 300668
Genes associated with rs35787518[chr3:8566845], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr3 8543393 8609805 + LMCD1 ENSG00000071282.7 8543393 0 Esophagus 0.116826 3372