EnhancerDB
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  3. rs35854525[chr1:178618604]
Enhancers that have rs35854525[chr1:178618604]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 178606845 178636895 enh759
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Large Intestine Ovary Esophagus Astrocyte Blood (OCI-LY7) Stomach Placenta Blood (Karpas-422) Lung (PC-9) Spleen Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs35854525[chr1:178618604]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 178618601 178618611 HOXC10 JASPAR yes 33433324
chr1 178618601 178618611 HOXD11 JASPAR yes 33433325
chr1 178618604 178618614 ALX3 JASPAR yes 33433326
chr1 178618604 178618614 ESX1 JASPAR yes 33433327
chr1 178618604 178618614 GSX2 JASPAR yes 33433328
chr1 178618604 178618614 HESX1 JASPAR yes 33433329
chr1 178618604 178618614 LHX6 JASPAR yes 33433330
chr1 178618604 178618614 MIXL1 JASPAR yes 33433331
chr1 178618604 178618614 MNX1 JASPAR yes 33433332
chr1 178618604 178618614 NOTO JASPAR yes 33433333
chr1 178618604 178618614 RAX JASPAR yes 33433334
Genes associated with rs35854525[chr1:178618604], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More