EnhancerDB
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  3. rs35939580[chr17:62973078]
Enhancers that have rs35939580[chr17:62973078]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 62953485 63000035 enh4531
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs35939580[chr17:62973078]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 62972692 62973606 ZBTB33 GTRD no Lung (A549) 21780706
chr17 62972785 62973456 ZBTB33 GTRD no Brain (SK-N-SH) 21780707
chr17 62972855 62973278 ZNF274 GTRD no Bone Marrow (K562) 21780708
chr17 62972902 62973143 ZNF274 GTRD no Bone Marrow (K562) 21780709
chr17 62972958 62973286 ZNF274 GTRD no Blood (GM12878) 21780710
chr17 62973068 62973086 E2F3 JASPAR yes 55333983
chr17 62973071 62973083 E2F1 JASPAR yes 55333984
Genes associated with rs35939580[chr17:62973078], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More