EnhancerDB
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  3. rs36034253[chr1:201421842]
Enhancers that have rs36034253[chr1:201421842]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201414985 201433510 enh875
Brain (SK-N-MC) Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs36034253[chr1:201421842]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201421579 201423197 MEF2B GTRD no Blood (Karpas-422) 21364046
chr1 201421614 201422613 ZNF143 GTRD no Epithelial (MCF-7) 21364047
chr1 201421829 201421844 MEF2C JASPAR yes 34495096
chr1 201421830 201421845 MEF2A JASPAR yes 34495097
chr1 201421831 201421843 MEF2A JASPAR yes 34495098
chr1 201421831 201421843 MEF2B JASPAR yes 34495099
chr1 201421831 201421843 MEF2D JASPAR yes 34495100
chr1 201421837 201421852 MEF2C JASPAR yes 34495101
chr1 201421837 201421858 IRF1 JASPAR yes 34495102
chr1 201421838 201421853 FOXP1 JASPAR yes 34495103
chr1 201421838 201421859 IRF1 JASPAR yes 34495104
chr1 201421839 201421854 FOXP1 JASPAR yes 34495105
chr1 201421840 201421855 FOXP1 JASPAR yes 34495106
chr1 201421840 201421861 IRF1 JASPAR yes 34495107
chr1 201421841 201421856 FOXP1 JASPAR yes 34495108
chr1 201421842 201421857 FOXP1 JASPAR yes 34495109
chr1 201421842 201421863 IRF1 JASPAR yes 34495110
Genes associated with rs36034253[chr1:201421842], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More