EnhancerDB
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  3. rs369142991[chr5:78054249]
Enhancers that have rs369142991[chr5:78054249]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 78038905 78058872 enh8512
Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Lung (PC-9) Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Stomach Peripheral Blood (MM.1S) Uterus Blood (Karpas-422) Muscle (Myoblast) Pancreas Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs369142991[chr5:78054249]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 78053960 78054650 NFIC UCSC Txn Factor no Conserved 108535512
chr5 78053960 78054650 NFIC UCSC Txn Factor no Conserved 108535513
chr5 78053975 78054461 RUNX3 UCSC Txn Factor no Conserved 108535514
chr5 78053975 78054461 RUNX3 UCSC Txn Factor no Conserved 108535515
chr5 78054005 78054253 NR2F2 UCSC Txn Factor no Conserved 108535516
chr5 78054014 78054254 BATF UCSC Txn Factor no Conserved 108535517
chr5 78054041 78054292 FOXA1 UCSC Txn Factor no Conserved 108535518
chr5 78054243 78054250 NKX3-1 JASPAR yes 63622510
chr5 78054244 78054252 FOXC1 JASPAR yes 63622511
Genes associated with rs369142991[chr5:78054249], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More