EnhancerDB
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  3. rs370574828[chr1:209579445]
Enhancers that have rs370574828[chr1:209579445]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 209568193 209597635 enh12617
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Placenta Colon (HCT116) Uterus Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Breast Spleen Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs370574828[chr1:209579445]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 209579305 209579799 ZNF274 GTRD no Cervix (HeLa-S3) 21375281
chr1 209579305 209579799 ZNF274 GTRD no Cervix (HeLa-S3) 107865739
chr1 209579333 209579794 ZNF274 GTRD no Bone Marrow (K562) 107865740
chr1 209579360 209579732 ZNF274 GTRD no Bone Marrow (K562) 107865741
chr1 209579372 209579776 ZNF274 GTRD no Liver (HepG2) 107865742
chr1 209579412 209579761 ZNF274 GTRD no Liver (HepG2) 107865743
chr1 209579444 209579455 HOXC12 JASPAR yes 34972324
chr1 209579444 209579455 HOXC13 JASPAR yes 34972325
Genes associated with rs370574828[chr1:209579445], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More