EnhancerDB
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  3. rs371001398[chr17:40556400]
Enhancers that have rs371001398[chr17:40556400]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 40556065 40574459 enh17161
Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs371001398[chr17:40556400]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 40546814 40566881 ZNF274 GTRD no Blood (GM12878) 108260637
chr17 40546874 40564174 ZBTB33 GTRD no Lung (A549) 108260638
chr17 40546896 40561581 ZBTB33 GTRD no Lung (A549) 108260639
chr17 40546905 40566597 ZNF274 GTRD no Blood (GM12878) 108260640
chr17 40546941 40565998 ZNF274 GTRD no Blood (GM12878) 108260641
chr17 40546985 40566407 ZNF274 GTRD no Blood (GM12878) 108260642
chr17 40556124 40562016 ZBTB33 GTRD no Lung (A549) 108260643
chr17 40556392 40556402 ZNF740 JASPAR yes 54301790
chr17 40556392 40556406 GLIS2 JASPAR yes 54301791
chr17 40556392 40556406 GLIS3 JASPAR yes 54301792
chr17 40556392 40556407 ZIC4 JASPAR yes 54301793
chr17 40556393 40556406 TFAP2A JASPAR yes 54301794
chr17 40556393 40556406 TFAP2B JASPAR yes 54301795
chr17 40556393 40556406 TFAP2C JASPAR yes 54301796
chr17 40556393 40556408 ZIC3 JASPAR yes 54301797
chr17 40556393 40556408 ZIC4 JASPAR yes 54301798
chr17 40556394 40556405 EBF1 JASPAR yes 54301799
chr17 40556394 40556407 TFAP2C JASPAR yes 54301800
chr17 40556394 40556408 ZIC1 JASPAR yes 54301801
chr17 40556396 40556407 EBF1 JASPAR yes 54301802
Genes associated with rs371001398[chr17:40556400], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More