EnhancerDB
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  3. rs371165354[chr17:78762644]
Enhancers that have rs371165354[chr17:78762644]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 78745025 78774551 enh4637
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Heart
Transcript factors that have rs371165354[chr17:78762644]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 78762629 78762644 MEF2C JASPAR yes 56279790
chr17 78762634 78762644 HOXA13 JASPAR yes 56279792
chr17 78762634 78762644 HOXB13 JASPAR yes 56279793
chr17 78762634 78762644 HOXC10 JASPAR yes 56279794
chr17 78762634 78762644 HOXD13 JASPAR yes 56279795
chr17 78762634 78762645 HOXA10 JASPAR yes 56279796
chr17 78762634 78762645 HOXC12 JASPAR yes 56279797
chr17 78762635 78762644 CDX1 JASPAR yes 56279798
chr17 78762635 78762645 MNX1 JASPAR yes 56279799
chr17 78762635 78762646 CDX2 JASPAR yes 56279800
Genes associated with rs371165354[chr17:78762644], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More