EnhancerDB
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  3. rs371397962[chr17:55623760]
Enhancers that have rs371397962[chr17:55623760]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55607567 55641035 enh4490
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Stomach Brain (SK-N-SH) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Blood (GM12878) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs371397962[chr17:55623760]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55623750 55623760 EMX1 JASPAR yes 54967500
chr17 55623750 55623760 EMX2 JASPAR yes 54967501
chr17 55623750 55623760 GBX2 JASPAR yes 54967502
chr17 55623750 55623760 HOXB2 JASPAR yes 54967503
chr17 55623750 55623760 HOXB3 JASPAR yes 54967504
chr17 55623750 55623760 LHX6 JASPAR yes 54967505
chr17 55623750 55623760 MEOX1 JASPAR yes 54967506
chr17 55623750 55623760 MEOX2 JASPAR yes 54967507
chr17 55623750 55623760 MNX1 JASPAR yes 54967508
chr17 55623750 55623760 POU6F1 JASPAR yes 54967509
chr17 55623753 55623761 HOXA5 JASPAR yes 54967518
chr17 55623760 55623773 POU3F3 JASPAR yes 54967519
chr17 55623760 55623774 POU1F1 JASPAR yes 54967520
Genes associated with rs371397962[chr17:55623760], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More