EnhancerDB
  1. Home
  2. SNP
  3. rs371677856[chr1:52108366]
Enhancers that have rs371677856[chr1:52108366]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 52099919 52117655 enh11848
Bone Marrow (K562) Liver Colon (HCT116) Adrenal Uterus Stomach Brain (SK-N-SH) Ovary Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs371677856[chr1:52108366]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 52108355 52108369 GATA2 JASPAR yes 28858504
chr1 52108359 52108367 GATA3 JASPAR yes 28858505
chr1 52108365 52108380 FOXP1 JASPAR yes 28858506
Genes associated with rs371677856[chr1:52108366], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More