EnhancerDB
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  3. rs371988423[chr17:38718109]
Enhancers that have rs371988423[chr17:38718109]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 38663309 38720551 enh17141
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr17 38718108 38719166 vista24740
VISTA
Transcript factors that have rs371988423[chr17:38718109]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 38707308 38722266 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21756012
chr17 38707308 38722266 POLR2A UCSC Txn Factor no Conserved 108256529
chr17 38707308 38722266 POLR2A UCSC Txn Factor no Conserved 108256530
chr17 38707308 38722266 POLR2A UCSC Txn Factor no Conserved 108256531
chr17 38707308 38722266 POLR2A UCSC Txn Factor no Conserved 108256532
chr17 38707308 38722266 POLR2A UCSC Txn Factor no Conserved 108256533
chr17 38707308 38722266 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108256534
chr17 38707308 38722266 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108256535
chr17 38707308 38722266 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108256536
chr17 38707308 38722266 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108256537
chr17 38707308 38722266 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108256538
chr17 38717489 38718147 TCF7L2 GTRD no Colon (HCT116) 21756154
chr17 38717489 38718147 TCF7L2 GTRD no Colon (HCT116) 108256729
chr17 38717726 38718126 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21756155
chr17 38717726 38718126 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108256730
chr17 38717946 38718382 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21756156
chr17 38717946 38718382 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108256731
chr17 38718007 38718597 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21756157
chr17 38718007 38718597 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108256732
chr17 38718046 38718566 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21756158
chr17 38718046 38718566 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108256733
chr17 38718063 38718483 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21756159
chr17 38718063 38718483 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108256734
chr17 38718081 38718391 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21756160
chr17 38718081 38718391 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108256735
chr17 38718083 38718463 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21756161
chr17 38718083 38718463 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108256736
chr17 38718109 38718114 TFAP2A TRANSFAC yes 21236221
chr17 38718109 38718114 TFAP2A TRANSFAC yes 54226711
chr17 38718109 38718115 MZF1 JASPAR yes 21236222
chr17 38718109 38718115 MZF1 JASPAR yes 54226712
chr17 38718109 38718122 NFKB1 JASPAR yes 21236223
chr17 38718109 38718122 NFKB1 JASPAR yes 54226713
Genes associated with rs371988423[chr17:38718109], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More