EnhancerDB
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  3. rs372188320[chr17:2853630]
Enhancers that have rs372188320[chr17:2853630]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 2849745 2866995 enh4215
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs372188320[chr17:2853630]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 2853620 2853630 TBX21 JASPAR yes 52788685
chr17 2853621 2853631 TBR1 JASPAR yes 52788691
chr17 2853621 2853634 SMAD2 JASPAR yes 52788692
chr17 2853630 2853634 H1TF2 TRANSFAC yes 52788693
chr17 2853630 2853634 NFE TRANSFAC yes 52788694
chr17 2853630 2853634 SRF TRANSFAC yes 52788695
Genes associated with rs372188320[chr17:2853630], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More