EnhancerDB
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  3. rs372879552[chr1:205257968]
Enhancers that have rs372879552[chr1:205257968]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 205243649 205259635 enh893
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Heart
Transcript factors that have rs372879552[chr1:205257968]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 205255845 205258730 ZNF143 GTRD no Epithelial (MCF-7) 21371476
chr1 205255845 205258730 ZNF143 GTRD no Epithelial (MCF-7) 107861507
chr1 205257531 205259590 ZNF274 GTRD no Bone Marrow (K562) 21371598
chr1 205257531 205259590 ZNF274 GTRD no Bone Marrow (K562) 107861584
chr1 205257928 205258702 ZNF143 GTRD no Epithelial (MCF-7) 21371601
chr1 205257967 205257985 RARA JASPAR yes 34751892
Genes associated with rs372879552[chr1:205257968], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More