EnhancerDB
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  3. rs373097546[chr1:3248288]
Enhancers that have rs373097546[chr1:3248288]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 3220368 3259315 enh11429
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Kidney Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 3244561 3248729 vista2
VISTA
Transcript factors that have rs373097546[chr1:3248288]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 3248275 3248288 SMAD2 JASPAR yes 26281026
chr1 3248275 3248288 SMAD2 JASPAR yes 71117987
chr1 3248275 3248290 RFX5 JASPAR yes 26281027
chr1 3248275 3248290 RFX5 JASPAR yes 71117988
Genes associated with rs373097546[chr1:3248288], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More