EnhancerDB
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  3. rs373377034[chr19:2563088]
Enhancers that have rs373377034[chr19:2563088]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2555465 2582297 enh17850
Astrocyte Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung
Transcript factors that have rs373377034[chr19:2563088]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2560204 2563156 ZNF274 GTRD no Blood (GM12878) 21837102
chr19 2560204 2563156 ZNF274 GTRD no Blood (GM12878) 108362414
chr19 2560779 2564390 ZNF274 GTRD no Blood (GM12878) 21837103
chr19 2560779 2564390 ZNF274 GTRD no Blood (GM12878) 108362415
chr19 2560843 2564216 ZNF274 GTRD no Blood (GM12878) 21837105
chr19 2560843 2564216 ZNF274 GTRD no Blood (GM12878) 108362417
chr19 2560892 2563156 ZNF274 GTRD no Blood (GM12878) 21837108
chr19 2560892 2563156 ZNF274 GTRD no Blood (GM12878) 108362420
chr19 2561476 2563621 ZNF274 GTRD no Blood (GM12878) 21837112
chr19 2561476 2563621 ZNF274 GTRD no Blood (GM12878) 108362424
chr19 2563084 2563096 ZBTB7A JASPAR yes 112075360
chr19 2563085 2563097 ZBTB7B JASPAR yes 112075361
chr19 2563085 2563097 ZBTB7C JASPAR yes 112075362
chr19 2563088 2563109 REST JASPAR yes 112075363
Genes associated with rs373377034[chr19:2563088], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More