EnhancerDB
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  3. rs373441642[chr1:225642073]
Enhancers that have rs373441642[chr1:225642073]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 225626185 225658051 enh950
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs373441642[chr1:225642073]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 225641508 225642117 TCF7L2 GTRD no Colon (HCT116) 21384750
chr1 225641783 225642253 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21384751
chr1 225641816 225642386 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21384752
chr1 225641834 225642338 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21384753
chr1 225641881 225642277 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21384754
chr1 225641922 225642262 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21384755
chr1 225641925 225642255 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21384756
chr1 225641932 225642208 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21384757
chr1 225641940 225642136 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21384758
chr1 225641976 225642200 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21384759
chr1 225641993 225642180 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21384760
chr1 225642008 225642664 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107874193
chr1 225642012 225642194 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21384761
chr1 225642058 225642166 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21384762
chr1 225642063 225642084 ZNF263 JASPAR yes 35742306
Genes associated with rs373441642[chr1:225642073], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More