EnhancerDB
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  3. rs373544472[chr1:223902323]
Enhancers that have rs373544472[chr1:223902323]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 223886085 223931782 enh12712
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs373544472[chr1:223902323]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 223902312 223902333 IRF1 JASPAR yes 35671450
chr1 223902316 223902331 FOXP1 JASPAR yes 35671452
chr1 223902318 223902333 FOXP1 JASPAR yes 35671453
chr1 223902318 223902339 IRF1 JASPAR yes 35671454
chr1 223902319 223902340 IRF1 JASPAR yes 35671455
chr1 223902320 223902335 FOXP1 JASPAR yes 35671456
chr1 223902321 223902336 FOXP1 JASPAR yes 35671457
chr1 223902321 223902342 IRF1 JASPAR yes 35671458
chr1 223902322 223902328 TBP TRANSFAC yes 35671459
chr1 223902322 223902337 FOXP1 JASPAR yes 35671460
chr1 223902322 223902343 IRF1 JASPAR yes 35671461
chr1 223902323 223902338 FOXP1 JASPAR yes 35671462
chr1 223902323 223902344 IRF1 JASPAR yes 35671463
Genes associated with rs373544472[chr1:223902323], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More