EnhancerDB
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  3. rs3737622[chr1:1620860]
Enhancers that have rs3737622[chr1:1620860]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 1607365 1622353 enh2
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs3737622[chr1:1620860]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 1620851 1620864 TFAP2A JASPAR yes 26199521
chr1 1620851 1620864 TFAP2B JASPAR yes 26199522
chr1 1620851 1620864 TFAP2C JASPAR yes 26199523
chr1 1620854 1620865 EBF1 JASPAR yes 26199524
chr1 1620858 1620863 TFAP2A TRANSFAC yes 26199525
chr1 1620858 1620864 MZF1 JASPAR yes 26199526
chr1 1620860 1620865 ETS2 TRANSFAC yes 26199527
Genes associated with rs3737622[chr1:1620860], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More