EnhancerDB
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  3. rs3738742[chr1:205248437]
Enhancers that have rs3738742[chr1:205248437]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 205243649 205259635 enh893
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Heart
Transcript factors that have rs3738742[chr1:205248437]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 205246524 205250029 ZNF274 GTRD no Bone Marrow (K562) 21371215
chr1 205246593 205250269 ZNF274 GTRD no Cervix (HeLa-S3) 21371216
chr1 205247161 205248799 ZNF274 GTRD no Cervix (HeLa-S3) 21371231
chr1 205247337 205250086 ZNF143 GTRD no Epithelial (MCF-7) 21371235
chr1 205247390 205249048 ZNF274 GTRD no Cervix (HeLa-S3) 21371236
chr1 205247742 205250034 ZNF143 GTRD no Epithelial (MCF-7) 21371240
chr1 205248262 205248601 ZNF274 GTRD no Cervix (HeLa-S3) 21371242
chr1 205248428 205248437 SNAI2 JASPAR yes 34750565
chr1 205248428 205248438 ID4 JASPAR yes 34750566
chr1 205248428 205248438 NHLH1 JASPAR yes 34750567
chr1 205248428 205248438 TCF3 JASPAR yes 34750568
chr1 205248428 205248438 TCF4 JASPAR yes 34750569
chr1 205248432 205248443 ESRRA JASPAR yes 34750570
Genes associated with rs3738742[chr1:205248437], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More