EnhancerDB
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Enhancers that have rs374139345[chr19:13142966]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 13138760 13157647 enh17929
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs374139345[chr19:13142966]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 13142055 13144205 TCF7L2 GTRD no Colon (HCT116) 21850182
chr19 13142055 13144205 TCF7L2 GTRD no Colon (HCT116) 108387507
chr19 13142572 13143500 TEF1 GTRD no Bone (Osteoblast) 21850183
chr19 13142572 13143500 TEF1 GTRD no Bone (Osteoblast) 108387508
chr19 13142651 13143439 ZNF274 GTRD no Bone Marrow (K562) 108387509
chr19 13142668 13143594 TCF7L2 GTRD no Colon (HCT116) 21850184
chr19 13142668 13143594 TCF7L2 GTRD no Colon (HCT116) 108387510
chr19 13142669 13143603 ZNF143 GTRD no Epithelial (MCF-7) 21850185
chr19 13142669 13143603 ZNF143 GTRD no Epithelial (MCF-7) 108387511
chr19 13142724 13143485 ZNF274 GTRD no Bone Marrow (K562) 108387512
chr19 13142729 13143603 ZNF143 GTRD no Epithelial (MCF-7) 21850186
chr19 13142729 13143603 ZNF143 GTRD no Epithelial (MCF-7) 108387513
chr19 13142731 13143105 ZNF274 GTRD no Liver (HepG2) 21850187
chr19 13142731 13143105 ZNF274 GTRD no Liver (HepG2) 108387514
chr19 13142735 13143249 ZNF274 GTRD no Bone Marrow (K562) 108387515
chr19 13142750 13143130 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21850188
chr19 13142750 13143130 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108387516
chr19 13142753 13143543 ZBTB33 GTRD no Lung (A549) 108387517
chr19 13142760 13143389 ZBTB33 GTRD no Lung (A549) 108387518
chr19 13142775 13143908 TCF7L2 GTRD no Colon (HCT116) 21850189
chr19 13142775 13143908 TCF7L2 GTRD no Colon (HCT116) 108387519
chr19 13142777 13143564 ZNF274 GTRD no Cervix (HeLa-S3) 21850190
chr19 13142777 13143564 ZNF274 GTRD no Cervix (HeLa-S3) 108387520
chr19 13142790 13143185 ZNF274 GTRD no Liver (HepG2) 21850191
chr19 13142790 13143185 ZNF274 GTRD no Liver (HepG2) 108387521
chr19 13142792 13143490 TCF7L2 GTRD no Colon (HCT116) 21850192
chr19 13142792 13143490 TCF7L2 GTRD no Colon (HCT116) 108387522
chr19 13142799 13143623 ZNF274 GTRD no Bone Marrow (K562) 108387523
chr19 13142843 13143615 ZNF143 GTRD no Epithelial (MCF-7) 21850193
chr19 13142843 13143615 ZNF143 GTRD no Epithelial (MCF-7) 108387524
chr19 13142864 13143467 ZNF274 GTRD no Bone Marrow (K562) 108387525
chr19 13142889 13143386 ZNF274 GTRD no Blood (GM12878) 108387526
chr19 13142895 13143470 TCF7L2 GTRD no Colon (HCT116) 21850194
chr19 13142895 13143470 TCF7L2 GTRD no Colon (HCT116) 108387527
chr19 13142931 13143622 ZBTB33 GTRD no Lung (A549) 108387528
chr19 13142935 13143744 ZNF143 GTRD no Epithelial (MCF-7) 21850195
chr19 13142935 13143744 ZNF143 GTRD no Epithelial (MCF-7) 108387529
chr19 13142936 13143623 ZNF274 GTRD no Bone Marrow (K562) 108387530
chr19 13142938 13143585 ZNF143 GTRD no Epithelial (MCF-7) 21850196
chr19 13142938 13143585 ZNF143 GTRD no Epithelial (MCF-7) 108387531
chr19 13142941 13143533 ZNF274 GTRD no Bone Marrow (K562) 108387532
chr19 13142945 13143364 ZNF274 GTRD no Blood (GM12878) 108387533
chr19 13142946 13142967 ZNF263 JASPAR yes 112502768
chr19 13142947 13142968 ZNF263 JASPAR yes 112502769
chr19 13142947 13143625 ZNF143 GTRD no Epithelial (MCF-7) 21850197
chr19 13142947 13143625 ZNF143 GTRD no Epithelial (MCF-7) 108387534
chr19 13142958 13143650 ZBTB33 GTRD no Lung (A549) 108387535
Genes associated with rs374139345[chr19:13142966], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More