EnhancerDB
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  3. rs374213392[chr19:13188320]
Enhancers that have rs374213392[chr19:13188320]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 13160145 13191995 enh17930
Astrocyte Colon (HCT116) Pancreas Uterus Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Lung Muscle (A673) Heart
chr19 13188264 13188490 vista28689
VISTA
Transcript factors that have rs374213392[chr19:13188320]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 13187611 13188359 TCF7L2 GTRD no Colon (HCT116) 21850676
chr19 13187611 13188359 TCF7L2 GTRD no Colon (HCT116) 108388762
chr19 13188062 13188358 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 108388763
chr19 13188095 13188662 GATA1 UCSC Txn Factor no Conserved 108388764
chr19 13188152 13188412 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108388765
chr19 13188194 13188470 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108388766
chr19 13188309 13188323 ZIC1 JASPAR yes 70808407
chr19 13188309 13188323 ZIC1 JASPAR yes 112508891
chr19 13188309 13188324 ZIC3 JASPAR yes 70808408
chr19 13188309 13188324 ZIC4 JASPAR yes 70808409
chr19 13188309 13188324 ZIC3 JASPAR yes 112508892
chr19 13188309 13188324 ZIC4 JASPAR yes 112508893
Genes associated with rs374213392[chr19:13188320], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More