EnhancerDB
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  3. rs3743128[chr15:40374894]
Enhancers that have rs3743128[chr15:40374894]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 40353665 40379655 enh16061
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs3743128[chr15:40374894]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 40374517 40374991 TCF7L2 GTRD no Colon (HCT116) 21650136
chr15 40374611 40375271 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21650137
chr15 40374693 40374993 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21650138
chr15 40374707 40375043 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21650139
chr15 40374739 40375029 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21650140
chr15 40374746 40375182 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21650141
chr15 40374754 40375134 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21650142
chr15 40374777 40375107 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21650143
chr15 40374818 40375105 SOX2 GTRD no Neural Stem Cells (H9) 21650144
chr15 40374818 40375154 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21650145
chr15 40374840 40375150 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21650146
chr15 40374854 40375118 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21650147
chr15 40374880 40375156 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21650148
chr15 40374883 40374904 IRF1 JASPAR yes 22928097
chr15 40374883 40375403 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21650149
chr15 40374887 40374901 STAT1 JASPAR yes 22928099
chr15 40374887 40374902 STAT2 JASPAR yes 22928100
chr15 40374891 40374896 ETS2 TRANSFAC yes 22928101
chr15 40374892 40374907 HNF4G JASPAR yes 22928102
chr15 40374893 40374908 HNF4A JASPAR yes 22928103
Genes associated with rs3743128[chr15:40374894], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More