EnhancerDB
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  3. rs374461539[chr2:217400236]
Enhancers that have rs374461539[chr2:217400236]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 217395170 217407835 enh19216
Brain (SK-N-MC) Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
chr2 217400220 217400574 vista34682
VISTA
Transcript factors that have rs374461539[chr2:217400236]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 217400179 217400463 NR3C1 UCSC Txn Factor no Conserved 108435121
chr2 217400227 217400242 AR JASPAR yes 22206216
chr2 217400227 217400242 AR JASPAR yes 80858926
chr2 217400231 217400245 MTF1 JASPAR yes 22206217
chr2 217400231 217400245 MTF1 JASPAR yes 80858927
chr2 217400236 217400247 FOXA1 JASPAR yes 22206218
chr2 217400236 217400247 FOXA1 JASPAR yes 80858928
chr2 217400236 217400251 FOXA1 JASPAR yes 22206219
chr2 217400236 217400251 FOXA1 JASPAR yes 80858929
Genes associated with rs374461539[chr2:217400236], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More