EnhancerDB
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  3. rs375216793[chr16:89540588]
Enhancers that have rs375216793[chr16:89540588]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 89534745 89554855 enh32031
Liver Astrocyte Colon (HCT116) Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs375216793[chr16:89540588]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 89540578 89540592 GATA2 JASPAR yes 12348297
chr16 89540579 89540592 DUXA JASPAR yes 12348298
chr16 89540580 89540588 GATA5 JASPAR yes 12348300
chr16 89540584 89540592 NR4A2 JASPAR yes 12348301
Genes associated with rs375216793[chr16:89540588], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More