EnhancerDB
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  3. rs375286928[chr17:59417126]
Enhancers that have rs375286928[chr17:59417126]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 59383635 59420035 enh17269
Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs375286928[chr17:59417126]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 59417120 59417135 MEF2C JASPAR yes 55150672
chr17 59417121 59417136 MEF2A JASPAR yes 55150673
chr17 59417123 59417138 FOXP1 JASPAR yes 55150674
chr17 59417124 59417130 TBP TRANSFAC yes 55150675
chr17 59417124 59417139 FOXP1 JASPAR yes 55150676
chr17 59417125 59417140 FOXP1 JASPAR yes 55150677
chr17 59417125 59417146 IRF1 JASPAR yes 55150678
chr17 59417126 59417141 FOXP1 JASPAR yes 55150679
chr17 59417126 59417147 IRF1 JASPAR yes 55150680
Genes associated with rs375286928[chr17:59417126], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More