EnhancerDB
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  3. rs375542139[chr12:124985622]
Enhancers that have rs375542139[chr12:124985622]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 124961018 125019902 enh2673
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs375542139[chr12:124985622]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 124985185 124985781 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 108068794
chr12 124985259 124985635 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21580918
chr12 124985259 124985635 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108068796
chr12 124985604 124985624 RREB1 JASPAR yes 124385466
chr12 124985606 124985626 RREB1 JASPAR yes 124385467
chr12 124985608 124985628 RREB1 JASPAR yes 124385468
chr12 124985610 124985630 RREB1 JASPAR yes 124385469
chr12 124985612 124985632 RREB1 JASPAR yes 124385470
chr12 124985614 124985634 RREB1 JASPAR yes 124385471
chr12 124985616 124985636 RREB1 JASPAR yes 124385472
chr12 124985618 124985638 RREB1 JASPAR yes 124385473
chr12 124985620 124985640 RREB1 JASPAR yes 124385474
chr12 124985622 124985642 RREB1 JASPAR yes 124385475
Genes associated with rs375542139[chr12:124985622], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More