EnhancerDB
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  3. rs375550478[chr16:85580161]
Enhancers that have rs375550478[chr16:85580161]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85541745 85623813 enh16872
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs375550478[chr16:85580161]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85578660 85580416 ZNF274 GTRD no Bone Marrow (K562) 21728600
chr16 85578686 85580273 ZNF274 GTRD no Bone Marrow (K562) 21728601
chr16 85579359 85580378 ZNF274 GTRD no Bone Marrow (K562) 21728613
chr16 85579574 85580431 ZNF274 GTRD no Bone Marrow (K562) 21728614
chr16 85579772 85580691 AR GTRD no Prostate (PC-3) 21728615
chr16 85579907 85580429 ZNF274 GTRD no Bone Marrow (K562) 21728616
chr16 85579931 85580366 ZBTB33 GTRD no Lung (A549) 21728617
chr16 85580040 85582876 ZNF143 GTRD no Epithelial (MCF-7) 21728618
chr16 85580050 85581468 TCF7L2 GTRD no Colon (HCT116) 21728619
chr16 85580089 85580246 ZNF274 GTRD no Liver (HepG2) 21728620
chr16 85580090 85580634 ZNF274 GTRD no Bone Marrow (K562) 21728621
chr16 85580104 85580620 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21728622
chr16 85580157 85580162 TFAP2A TRANSFAC yes 12074751
chr16 85580157 85580163 MZF1 JASPAR yes 12074752
Genes associated with rs375550478[chr16:85580161], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More